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https://gitlab.alpinelinux.org/alpine/aports.git
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bdfe53324e
a65b512cdc is their only contribution,
this saves us having to remember or look up their activity and
probability to approve merge requests for this aport.
36 lines
1,017 B
Text
36 lines
1,017 B
Text
# Contributor: Charles Pritchard <chuck@jumis.com>
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# Maintainer:
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pkgname=py3-biopython
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pkgver=1.85
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pkgrel=0
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pkgdesc="Python tools for computational molecular biology."
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options="!check" # test_NCBI_qblast hangs
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url="https://biopython.org/"
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arch="all"
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license="BSD-3-Clause"
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depends="py3-numpy python3"
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makedepends="py3-gpep517 py3-setuptools py3-wheel py3-numpy-dev python3-dev"
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subpackages="$pkgname-pyc"
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source="https://files.pythonhosted.org/packages/source/b/biopython/biopython-$pkgver.tar.gz"
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builddir="$srcdir/biopython-$pkgver"
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build() {
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gpep517 build-wheel \
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--wheel-dir .dist \
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--output-fd 3 3>&1 >&2
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}
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check() {
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python3 -m venv --clear --without-pip --system-site-packages .testenv
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.testenv/bin/python3 -m installer .dist/*.whl
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.testenv/bin/python3 -m unittest
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}
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package() {
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python3 -m installer -d "$pkgdir" \
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.dist/*.whl
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}
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sha512sums="
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a9bff4fdf34f71f74f35a9bbf25887d6fcf84622d77854e11b0da418b6ff88c7d6e49474d82ca2e4da782ea07cc28f03b43b219b798a806ab02e11af21cd9dab biopython-1.85.tar.gz
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"
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